Welcome to BMSE’s documentation!

Contents:

• Getting Started
  • Overview
  • Deployed Search Engine
  • Documentation
  • Requirements
  • Local installation using Docker
  • How to deploy?
  • Related repositories
• Tutorials
  • Simple entity search
  • Variabel comparison

CBLW09

Mathieu Cloutier, Fiachra B. Bolger, John P. Lowry, and Peter Wellstead. An integrative dynamic model of brain energy metabolism using in vivo neurochemical measurements. Journal of Computational Neuroscience, 27(3):391, April 2009. doi:10.1007/s10827-009-0152-8.

FR00

G. M. Faber and Y. Rudy. Action potential and contractility changes in [Na(+)](i) overloaded cardiac myocytes: a simulation study. Biophysical Journal, 78(5):2392–2404, May 2000. doi:10.1016/S0006-3495(00)76783-X.

MRN22

Yuda Munarko, Anand Rampadarath, and David Phillip Nickerson. CASBERT: BERT-Based Retrieval for Compositely Annotated Biosimulation Model Entities. November 2022. doi:10.1101/2022.11.22.517475.

VSR99

P. C. Viswanathan, R. M. Shaw, and Y. Rudy. Effects of IKr and IKs heterogeneity on action potential duration and its rate dependence: a simulation study. Circulation, 99(18):2466–2474, May 1999. doi:10.1161/01.cir.99.18.2466.

WRJ+99

R. L. Winslow, J. Rice, S. Jafri, E. Marbán, and B. O'Rourke. Mechanisms of altered excitation-contraction coupling in canine tachycardia-induced heart failure, II: model studies. Circulation Research, 84(5):571–586, March 1999. doi:10.1161/01.res.84.5.571.